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  3. The Swiss Pathogen Surveillance Platform - towards a nation-wide One Health data exchange platform for bacterial, viral and fungal genomics and associated metadata.
 

The Swiss Pathogen Surveillance Platform - towards a nation-wide One Health data exchange platform for bacterial, viral and fungal genomics and associated metadata.

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BORIS DOI
10.48350/182522
Date of Publication
May 2023
Publication Type
Article
Division/Institute

Institut für Infektio...

Institut für Veterinä...

Author
Neves, Aitana
Walther, Daniel
Martin-Campos, Trinidad
Barbie, Valerie
Bertelli, Claire
Blanc, Dominique
Bouchet, Gérard
Erard, Frédéric
Greub, Gilbert
Hirsch, Hans H
Huber, Michael
Kaiser, Laurent
Leib, Stephenorcid-logo
Institut für Infektionskrankheiten (IFIK) - Forschung
Leuzinger, Karoline
Lazarevic, Vladimir
Mäusezahl, Mirjam
Molina, Jorge
Neher, Richard A
Perreten, Vincentorcid-logo
Institut für Veterinärbakteriologie (IVB)
Institut für Veterinärbakteriologie (IVB) - MolEpi & Infektiologie
Ramette, Alban Nicolasorcid-logo
Institut für Infektionskrankheiten (IFIK) - Forschung
Institut für Infektionskrankheiten (IFIK)
Roloff, Tim
Schrenzel, Jacques
Seth-Smith, Helena M B
Stephan, Roger
Terumalai, Dillenn
Wegner, Fanny
Egli, Adrian
Subject(s)

600 - Technology::630...

500 - Science::570 - ...

600 - Technology::610...

Series
Microbial genomics
ISSN or ISBN (if monograph)
2057-5858
Publisher
Microbiology Society
Language
English
Publisher DOI
10.1099/mgen.0.001001
PubMed ID
37171846
Uncontrolled Keywords

antibiotic resistance...

Description
The Swiss Pathogen Surveillance Platform (SPSP) is a shared secure surveillance platform between human and veterinary medicine, to also include environmental and foodborne isolates. It enables rapid and detailed transmission monitoring and outbreak surveillance of pathogens using whole genome sequencing data and associated metadata. It features controlled data access, complex dynamic queries, dedicated dashboards and automated data sharing with international repositories, providing actionable results for public health and the vision to improve societal well-being and health.
Handle
https://boris-portal.unibe.ch/handle/20.500.12422/202291
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File(s)
FileFile TypeFormatSizeLicensePublisher/Copright statementContent
mgen001001.pdftextAdobe PDF2.91 MBpublishedOpen
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