The Swiss Pathogen Surveillance Platform - towards a nation-wide One Health data exchange platform for bacterial, viral and fungal genomics and associated metadata.
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BORIS DOI
Date of Publication
May 2023
Publication Type
Article
Division/Institute
Author
Neves, Aitana | |
Walther, Daniel | |
Martin-Campos, Trinidad | |
Barbie, Valerie | |
Bertelli, Claire | |
Blanc, Dominique | |
Bouchet, Gérard | |
Erard, Frédéric | |
Greub, Gilbert | |
Hirsch, Hans H | |
Huber, Michael | |
Kaiser, Laurent | |
Leuzinger, Karoline | |
Lazarevic, Vladimir | |
Mäusezahl, Mirjam | |
Molina, Jorge | |
Neher, Richard A | |
Roloff, Tim | |
Schrenzel, Jacques | |
Seth-Smith, Helena M B | |
Stephan, Roger | |
Terumalai, Dillenn | |
Wegner, Fanny | |
Egli, Adrian |
Series
Microbial genomics
ISSN or ISBN (if monograph)
2057-5858
Publisher
Microbiology Society
Language
English
Publisher DOI
PubMed ID
37171846
Uncontrolled Keywords
Description
The Swiss Pathogen Surveillance Platform (SPSP) is a shared secure surveillance platform between human and veterinary medicine, to also include environmental and foodborne isolates. It enables rapid and detailed transmission monitoring and outbreak surveillance of pathogens using whole genome sequencing data and associated metadata. It features controlled data access, complex dynamic queries, dedicated dashboards and automated data sharing with international repositories, providing actionable results for public health and the vision to improve societal well-being and health.
File(s)
File | File Type | Format | Size | License | Publisher/Copright statement | Content | |
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mgen001001.pdf | text | Adobe PDF | 2.91 MB | published |