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  3. Machine Learning Made Easy (MLme): a comprehensive toolkit for machine learning-driven data analysis.
 

Machine Learning Made Easy (MLme): a comprehensive toolkit for machine learning-driven data analysis.

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BORIS DOI
10.48350/191551
Date of Publication
January 2, 2024
Publication Type
Article
Division/Institute

Department for BioMed...

Universitätsklinik fü...

Contributor
Akshay, Akshayorcid-logo
Department for BioMedical Research, Forschungsgruppe Urologie
Katoch, Mitali
Shekarchizadeh, Navid
Abedi, Masoud
Sharma, Ankush
Burkhard, Fiona Christine
Universitätsklinik für Urologie
Department for BioMedical Research, Forschungsgruppe Urologie
Adam, Rosalyn M
Monastyrskaya-Stäuber, Katia
Universitätsklinik für Urologie
Department for BioMedical Research, Forschungsgruppe Urologie
Hashemi Gheinani, Aliorcid-logo
Universitätsklinik für Urologie
Department for BioMedical Research, Forschungsgruppe Urologie
Subject(s)

600 - Technology::610...

Series
GigaScience
ISSN or ISBN (if monograph)
2047-217X
Publisher
Oxford University Press
Language
English
Publisher DOI
10.1093/gigascience/giad111
PubMed ID
38206587
Uncontrolled Keywords

AutoML classification...

Description
BACKGROUND

Machine learning (ML) has emerged as a vital asset for researchers to analyze and extract valuable information from complex datasets. However, developing an effective and robust ML pipeline can present a real challenge, demanding considerable time and effort, thereby impeding research progress. Existing tools in this landscape require a profound understanding of ML principles and programming skills. Furthermore, users are required to engage in the comprehensive configuration of their ML pipeline to obtain optimal performance.

RESULTS

To address these challenges, we have developed a novel tool called Machine Learning Made Easy (MLme) that streamlines the use of ML in research, specifically focusing on classification problems at present. By integrating 4 essential functionalities-namely, Data Exploration, AutoML, CustomML, and Visualization-MLme fulfills the diverse requirements of researchers while eliminating the need for extensive coding efforts. To demonstrate the applicability of MLme, we conducted rigorous testing on 6 distinct datasets, each presenting unique characteristics and challenges. Our results consistently showed promising performance across different datasets, reaffirming the versatility and effectiveness of the tool. Additionally, by utilizing MLme's feature selection functionality, we successfully identified significant markers for CD8+ naive (BACH2), CD16+ (CD16), and CD14+ (VCAN) cell populations.

CONCLUSION

MLme serves as a valuable resource for leveraging ML to facilitate insightful data analysis and enhance research outcomes, while alleviating concerns related to complex coding scripts. The source code and a detailed tutorial for MLme are available at https://github.com/FunctionalUrology/MLme.
Handle
https://boris-portal.unibe.ch/handle/20.500.12422/173332
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FileFile TypeFormatSizeLicensePublisher/Copright statementContent
giad111.pdftextAdobe PDF2.18 MBAttribution (CC BY 4.0)publishedOpen
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