Altmann, AndreAndreAltmannRyten, MinaMinaRytenDi Nunzio, MartinaMartinaDi NunzioRavizza, TeresaTeresaRavizzaTolomeo, DanieleDanieleTolomeoReynolds, Regina HRegina HReynoldsSomani, AlymaAlymaSomaniBacigaluppi, MarcoMarcoBacigaluppiIori, ValentinaValentinaIoriMicotti, EdoardoEdoardoMicottiDi Sapia, RossellaRossellaDi SapiaCerovic, MilicaMilicaCerovicPalma, EleonoraEleonoraPalmaRuffolo, GabrieleGabrieleRuffoloBotía, Juan AJuan ABotíaAbsil, JulieJulieAbsilAlhusaini, SaudSaudAlhusainiAlvim, Marina K MMarina K MAlvimAuvinen, PiaPiaAuvinenBargallo, NuriaNuriaBargalloBartolini, EmanueleEmanueleBartoliniBender, BenjaminBenjaminBenderBergo, Felipe P GFelipe P GBergoBernardes, TauanaTauanaBernardesBernasconi, AndreaAndreaBernasconiBernasconi, NedaNedaBernasconiBernhardt, Boris CBoris CBernhardtBlackmon, KarenKarenBlackmonBraga, BarbaraBarbaraBragaCaligiuri, Maria EugeniaMaria EugeniaCaligiuriCalvo, AnnaAnnaCalvoCarlson, ChadChadCarlsonCarr, Sarah J ASarah J ACarrCavalleri, Gianpiero LGianpiero LCavalleriCendes, FernandoFernandoCendesChen, JianJianChenChen, ShuaiShuaiChenCherubini, AndreaAndreaCherubiniConcha, LuisLuisConchaDavid, PhilippePhilippeDavidDelanty, NormanNormanDelantyDepondt, ChantalChantalDepondtDevinsky, OrrinOrrinDevinskyDoherty, Colin PColin PDohertyDomin, MartinMartinDominFocke, Niels KNiels KFockeFoley, SonyaSonyaFoleyFranca, WendyWendyFrancaGambardella, AntonioAntonioGambardellaGuerrini, RenzoRenzoGuerriniHamandi, KhalidKhalidHamandiHibar, Derrek PDerrek PHibarIsaev, DmitryDmitryIsaevJackson, Graeme DGraeme DJacksonJahanshad, NedaNedaJahanshadKälviäinen, ReettaReettaKälviäinenKeller, Simon SSimon SKellerKochunov, PeterPeterKochunovKotikalapudi, RavitejaRavitejaKotikalapudiKowalczyk, Magdalena AMagdalena AKowalczykKuzniecky, RubenRubenKuznieckyKwan, PatrickPatrickKwanLabate, AngeloAngeloLabateLangner, SoenkeSoenkeLangnerLenge, MatteoMatteoLengeLiu, MinMinLiuMartin, PascalPascalMartinMascalchi, MarioMarioMascalchiMeletti, StefanoStefanoMelettiMorita-Sherman, Marcia EMarcia EMorita-ShermanO'Brien, Terence JTerence JO'BrienPariente, Jose CJose CParienteRichardson, Mark PMark PRichardsonRodriguez-Cruces, RaulRaulRodriguez-CrucesRummel, ChristianChristianRummelSaavalainen, TaaviTaaviSaavalainenSemmelroch, Mira KMira KSemmelrochSeverino, MariasavinaMariasavinaSeverinoStriano, PasqualePasqualeStrianoThesen, ThomasThomasThesenThomas, Rhys HRhys HThomasTondelli, ManuelaManuelaTondelliTortora, DomenicoDomenicoTortoraVaudano, Anna ElisabettaAnna ElisabettaVaudanoVivash, LucyLucyVivashvon Podewils, FelixFelixvon PodewilsWagner, JanJanWagnerWeber, BerndBerndWeberWiest, Roland Gerhard RudiRoland Gerhard RudiWiestYasuda, Clarissa LClarissa LYasudaZhang, GuohaoGuohaoZhangZhang, JunsongJunsongZhangLeu, CostinCostinLeuAvbersek, AndrejaAndrejaAvbersekThom, MariaMariaThomWhelan, Christopher DChristopher DWhelanThompson, PaulPaulThompson2024-09-022024-09-022022-02https://boris-portal.unibe.ch/handle/20.500.12422/43749AIMS The causes of distinct patterns of reduced cortical thickness in the common human epilepsies, detectable on neuroimaging and with important clinical consequences, are unknown. We investigated the underlying mechanisms of cortical thinning using a systems-level analysis. METHODS Imaging-based cortical structural maps from a large-scale epilepsy neuroimaging study were overlaid with highly spatially resolved human brain gene expression data from the Allen Human Brain Atlas. Cell-type deconvolution, differential expression analysis and cell-type enrichment analyses were used to identify differences in cell-type distribution. These differences were followed up in post-mortem brain tissue from humans with epilepsy using Iba1 immunolabelling. Furthermore, to investigate a causal effect in cortical thinning, cell-type-specific depletion was used in a murine model of acquired epilepsy. RESULTS We identified elevated fractions of microglia and endothelial cells in regions of reduced cortical thickness. Differentially expressed genes showed enrichment for microglial markers and, in particular, activated microglial states. Analysis of post-mortem brain tissue from humans with epilepsy confirmed excess activated microglia. In the murine model, transient depletion of activated microglia during the early phase of the disease development prevented cortical thinning and neuronal cell loss in the temporal cortex. Although the development of chronic seizures was unaffected, the epileptic mice with early depletion of activated microglia did not develop deficits in a non-spatial memory test seen in epileptic mice not depleted of microglia. CONCLUSIONS These convergent data strongly implicate activated microglia in cortical thinning, representing a new dimension for concern and disease modification in the epilepsies, potentially distinct from seizure control.enMRI cortical thinning gene expression post mortem600 - Technology::610 - Medicine & healtharticle10.48350/1593813438885210.1111/nan.12758