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  3. Complete genome for Actinobacillus pleuropneumoniae serovar 8 reference strain 405: comparative analysis with draft genomes for different laboratory stock cultures indicates little genetic variation.
 

Complete genome for Actinobacillus pleuropneumoniae serovar 8 reference strain 405: comparative analysis with draft genomes for different laboratory stock cultures indicates little genetic variation.

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BORIS DOI
10.48350/166759
Date of Publication
November 2021
Publication Type
Article
Division/Institute

Institut für Veterinä...

Author
Bossé, Janine T
Li, Yanwen
Cohen, Liza Miriam
Stegger, Marc
Angen, Øystein
Lacouture, Sonia
Gottschalk, Marcelo
Lei, Liancheng
Koene, Miriam
Kuhnert, Peterorcid-logo
Institut für Veterinärbakteriologie (IVB)
Bandara, Aloka B
Inzana, Thomas J
Holden, Matthew T G
Harris, David
Oshota, Olusegun
Maskell, Duncan J
Tucker, Alexander W
Wren, Brendan W
Rycroft, Andrew N
Langford, Paul R
Subject(s)

500 - Science::570 - ...

600 - Technology::630...

Series
Microbial genomics
ISSN or ISBN (if monograph)
2057-5858
Publisher
Microbiology Society
Language
English
Publisher DOI
10.1099/mgen.0.000687
PubMed ID
34818145
Uncontrolled Keywords

Actinobacillus pleuro...

Description
We report here the complete genome sequence of the widely studied Actinobacillus pleuropneumoniae serovar 8 reference strain 405, generated using the Pacific Biosciences (PacBio) RS II platform. Furthermore, we compared draft sequences generated by Illumina sequencing of six stocks of this strain, including the same original stock used to generate the PacBio sequence, held in different countries and found little genetic variation, with only three SNPs identified, all within the degS gene. However, sequences of two small plasmids, pARD3079 and p405tetH, detected by Illumina sequencing of the draft genomes were not identified in the PacBio sequence of the reference strain.
Handle
https://boris-portal.unibe.ch/handle/20.500.12422/68312
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File(s)
FileFile TypeFormatSizeLicensePublisher/Copright statementContent
160._App_Sero8_Genome.pdftextAdobe PDF222.17 KBpublishedOpen
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