Complete genome for Actinobacillus pleuropneumoniae serovar 8 reference strain 405: comparative analysis with draft genomes for different laboratory stock cultures indicates little genetic variation.
Options
BORIS DOI
Date of Publication
November 2021
Publication Type
Article
Division/Institute
Author
Bossé, Janine T | |
Li, Yanwen | |
Cohen, Liza Miriam | |
Stegger, Marc | |
Angen, Øystein | |
Lacouture, Sonia | |
Gottschalk, Marcelo | |
Lei, Liancheng | |
Koene, Miriam | |
Bandara, Aloka B | |
Inzana, Thomas J | |
Holden, Matthew T G | |
Harris, David | |
Oshota, Olusegun | |
Maskell, Duncan J | |
Tucker, Alexander W | |
Wren, Brendan W | |
Rycroft, Andrew N | |
Langford, Paul R |
Series
Microbial genomics
ISSN or ISBN (if monograph)
2057-5858
Publisher
Microbiology Society
Language
English
Publisher DOI
PubMed ID
34818145
Uncontrolled Keywords
Description
We report here the complete genome sequence of the widely studied Actinobacillus pleuropneumoniae serovar 8 reference strain 405, generated using the Pacific Biosciences (PacBio) RS II platform. Furthermore, we compared draft sequences generated by Illumina sequencing of six stocks of this strain, including the same original stock used to generate the PacBio sequence, held in different countries and found little genetic variation, with only three SNPs identified, all within the degS gene. However, sequences of two small plasmids, pARD3079 and p405tetH, detected by Illumina sequencing of the draft genomes were not identified in the PacBio sequence of the reference strain.
File(s)
File | File Type | Format | Size | License | Publisher/Copright statement | Content | |
---|---|---|---|---|---|---|---|
160._App_Sero8_Genome.pdf | text | Adobe PDF | 222.17 KB | published |