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A comprehensive European Colorectal Cancer Cohort dataset.

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BORIS DOI
10.48620/96958
Publisher DOI
10.1038/s41597-026-06822-2
PubMed ID
41820399
Description
Colorectal cancer (CRC) is a leading cause of cancer-related deaths worldwide. The Biobanking and Biomolecular Resources European Research Infrastructure (BBMRI-ERIC) established a CRC-Cohort with European coverage contributed by 26 biobanks from 12 countries. This retrospective, multi-center study contains structured and curated clinical data, supporting research on biomarkers for early detection, prognosis, and treatment. A phenotypical/clinical data model has been defined and individual-level data from 10,780 CRC patients have been collected at BBMRI-ERIC in the central data deposition service hosted as part of its services. The participating biobanks host additional data, which can be accessed on request and used to derive additional data. This mechanism has been used to extend the collected data with scans of histopathological slides to support research in artificial intelligence in digital pathology and with whole genome sequencing data to pilot a use case of the upcoming European Health Data Space (EHDS). Here we present the methodology, the quality assurance mechanisms, and the implementation of FAIR and FAIR-Health principles applied to build the CRC-Cohort.
Date of Publication
2026-03-12
Publication Type
Article
Subject(s)
600 Technology > 610 Medicine & health
Language(s)
en
Contributor(s)
Holub, Petr
Törnwall, Outi
Garcia Alvarez, Eva
Proynova, Rumyana
Stampe, Florian
Maqsood, Saher
Ataian, Maxmilian
Schlünder, Irene
Carpén, Olli
Meijer, Gerrit
Nenutil, Rudolf
Valík, Dalibor
Parodi, Barbara
Hiemstra, Annemieke
Bierkens, Mariska
Castanos-Vélez, Esmeralda
Ückert, Frank
Alexandre, Diogo
Vojtíšek, Ondřej
Bader, Anna-Liisa
Simell, Birgit
Ahern, Caitlin
Horvat, Vitomir
Steinfelder, Erik
Gnocchi, Matteo
Moscatelli, Marco
Fürbaß, Alexander
Horák, Jiří
Frexia, Francesca
Mascia, Cecilia
Sulis, Alessandro
Delussu, Giovanni
Del Rio, Mauro
Meloni, Vittorio
Pireddu, Luca
Leo, Simone
Piras, Marco Enrico
Kačenga, Martin
Gofflot, Stéphanie
Mate, Sebastian
Prokosch, Hans-Ulrich
Romano, Paolo
Pistillo, Daniela
Hoffmeister, Michael
Brobeil, Alexander
Kugic, Amila
Huppertz, Berthold
Paleari, Valentina
Müller, Heimo
Reihs, Robert
Gemoll, Timo
Bantel, Yannick
Sjöblom, Tobias
Kyriacou, Kyriacos
Martino, Simona di
Ciliberto, Gennaro
Kock-Schoppenhauer, Ann-Kristin
Oberländer, Martina
Habermann, Jens K
Husmann, Gabriele
Edqvist, Per-Henrik D
Zlobec, Intiorcid-logo
Institute of Tissue Medicine and Pathology
Institute of Tissue Medicine and Pathology, Digital Pathology
Berger, Martin D.
Clinic of Medical Oncology
Boeckmann, Lars
George, Fabienne
Southerington, Tom
Brucker, Daniel P
Faugeras, Laurence
Vella, Joanna
Felice, Alex
Pace, Malcolm
Fallerini, Chiara
Renieri, Alessandra
Hadjisavvas, Andreas
Sargsyan, Karine
Loizidou, Maria A
Besse-Hammer, Tatiana
Vogl, Franziska
Litton, Jan-Eric
Hummel, Michael
Zatloukal, Kurt
Lavitrano, Marialuisa
Additional Credits
Institute of Tissue Medicine and Pathology
Clinic of Medical Oncology
Institute of Tissue Medicine and Pathology, Digital Pathology
Series
Scientific Data
Publisher
Nature Research
ISSN
2052-4463
Access(Rights)
open.access
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