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Improved accuracy and precision of fat-suppressed isotropic 3D T2 mapping MRI of the knee with dictionary fitting and patch-based denoising.

cris.virtual.author-orcid0000-0002-5485-1308
cris.virtualsource.author-orcidaa05206c-4699-47aa-8a63-f386e955be15
datacite.rightsopen.access
dc.contributor.authorKuhn, Simon
dc.contributor.authorBustin, Aurélien
dc.contributor.authorLamri-Senouci, Aicha
dc.contributor.authorRumac, Simone
dc.contributor.authorLedoux, Jean-Baptiste
dc.contributor.authorColotti, Roberto
dc.contributor.authorBastiaansen, Jessica
dc.contributor.authorYerly, Jérôme
dc.contributor.authorFavre, Julien
dc.contributor.authorOmoumi, Patrick
dc.contributor.authorvan Heeswijk, Ruud B
dc.date.accessioned2024-10-25T16:32:35Z
dc.date.available2024-10-25T16:32:35Z
dc.date.issued2023-05-22
dc.description.abstractPURPOSE To develop an isotropic three-dimensional (3D) T2 mapping technique for the quantitative assessment of the composition of knee cartilage with high accuracy and precision. METHODS A T2-prepared water-selective isotropic 3D gradient-echo pulse sequence was used to generate four images at 3 T. These were used for three T2 map reconstructions: standard images with an analytical T2 fit (AnT2Fit); standard images with a dictionary-based T2 fit (DictT2Fit); and patch-based-denoised images with a dictionary-based T2 fit (DenDictT2Fit). The accuracy of the three techniques was first optimized in a phantom study against spin-echo imaging, after which knee cartilage T2 values and coefficients of variation (CoV) were assessed in ten subjects in order to establish accuracy and precision in vivo. Data given as mean ± standard deviation. RESULTS After optimization in the phantom, whole-knee cartilage T2 values of the healthy volunteers were 26.6 ± 1.6 ms (AnT2Fit), 42.8 ± 1.8 ms (DictT2Fit, p < 0.001 versus AnT2Fit), and 40.4 ± 1.7 ms (DenDictT2Fit, p = 0.009 versus DictT2Fit). The whole-knee T2 CoV reduced from 51.5% ± 5.6% to 30.5 ± 2.4 and finally to 13.1 ± 1.3%, respectively (p < 0.001 between all). The DictT2Fit improved the data reconstruction time: 48.7 ± 11.3 min (AnT2Fit) versus 7.3 ± 0.7 min (DictT2Fit, p < 0.001). Very small focal lesions were observed in maps generated with DenDictT2Fit. CONCLUSIONS Improved accuracy and precision for isotropic 3D T2 mapping of knee cartilage were demonstrated by using patch-based image denoising and dictionary-based reconstruction. KEY POINTS • Dictionary T2 fitting improves the accuracy of three-dimensional (3D) knee T2 mapping. • Patch-based denoising results in high precision in 3D knee T2 mapping. • Isotropic 3D knee T2 mapping enables the visualization of small anatomical details.
dc.description.sponsorshipUniversitätsinstitut für Diagnostische, Interventionelle und Pädiatrische Radiologie (DIPR)
dc.identifier.doi10.48350/182738
dc.identifier.pmid37211577
dc.identifier.publisherDOI10.1186/s41747-023-00339-8
dc.identifier.urihttps://boris-portal.unibe.ch/handle/20.500.12422/167281
dc.language.isoen
dc.publisherSpringer
dc.relation.ispartofEuropean radiology experimental
dc.relation.issn2509-9280
dc.relation.organizationDCD5A442BB1CE17DE0405C82790C4DE2
dc.subjectCartilage Knee joint Magnetic resonance imaging Phantoms (imaging)
dc.subject.ddc600 - Technology::610 - Medicine & health
dc.titleImproved accuracy and precision of fat-suppressed isotropic 3D T2 mapping MRI of the knee with dictionary fitting and patch-based denoising.
dc.typearticle
dspace.entity.typePublication
dspace.file.typetext
oaire.citation.issue1
oaire.citation.startPage25
oaire.citation.volume7
oairecerif.author.affiliationUniversitätsinstitut für Diagnostische, Interventionelle und Pädiatrische Radiologie (DIPR)
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unibe.date.licenseChanged2023-05-23 13:30:25
unibe.description.ispublishedpub
unibe.eprints.legacyId182738
unibe.refereedtrue
unibe.subtype.articlejournal

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