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Publication:
Spatial and Temporal Evolutionary Patterns in Puumala Orthohantavirus (PUUV) S Segment

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dc.contributor.authorBinder, Florian
dc.contributor.authorRyll, René
dc.contributor.authorDrewes, Stephan
dc.contributor.authorJagdmann, Sandra
dc.contributor.authorReil, Daniela
dc.contributor.authorHiltbrunner, Melanie
dc.contributor.authorRosenfeld, Ulrike M.
dc.contributor.authorImholt, Christian
dc.contributor.authorJacob, Jens
dc.contributor.authorHeckel, Gerald
dc.contributor.authorUlrich, Rainer G.
dc.date.accessioned2024-09-02T16:10:12Z
dc.date.available2024-09-02T16:10:12Z
dc.date.issued2020-07-08
dc.description.abstractThe S segment of bank vole (Clethrionomys glareolus)-associated Puumala orthohantavirus (PUUV) contains two overlapping open reading frames coding for the nucleocapsid (N) and a non-structural (NSs) protein. To identify the influence of bank vole population dynamics on PUUV S segment sequence evolution and test for spillover infections in sympatric rodent species, during 2010–2014, 883 bank voles, 357 yellow-necked mice (Apodemus flavicollis), 62 wood mice (A. sylvaticus), 149 common voles (Microtus arvalis) and 8 field voles (M. agrestis) were collected in Baden-Wuerttemberg and North Rhine-Westphalia, Germany. In total, 27.9% and 22.3% of bank voles were positive for PUUV-reactive antibodies and PUUV-specific RNA, respectively. One of eight field voles was PUUV RNA-positive, indicating a spillover infection, but none of the other species showed evidence of PUUV infection. Phylogenetic and isolation-by-distance analyses demonstrated a spatial clustering of PUUV S segment sequences. In the hantavirus outbreak years 2010 and 2012, PUUV RNA prevalence was higher in our study regions compared to non-outbreak years 2011, 2013 and 2014. NSs amino acid and nucleotide sequence types showed temporal and/or local variation, whereas the N protein was highly conserved in the NSs overlapping region and, to a lower rate, in the N alone coding part.
dc.description.sponsorshipInstitut für Ökologie und Evolution (IEE)
dc.identifier.doi10.7892/boris.146071
dc.identifier.pmid32650456
dc.identifier.publisherDOI10.3390/pathogens9070548
dc.identifier.urihttps://boris-portal.unibe.ch/handle/20.500.12422/36928
dc.language.isoen
dc.publisherMDPI AG
dc.relation.ispartofPathogens
dc.relation.issn2076-0817
dc.relation.organizationDCD5A442C150E17DE0405C82790C4DE2
dc.relation.organizationDCD5A442C18CE17DE0405C82790C4DE2
dc.subject.ddc500 - Science::570 - Life sciences; biology
dc.titleSpatial and Temporal Evolutionary Patterns in Puumala Orthohantavirus (PUUV) S Segment
dc.typearticle
dspace.entity.typePublication
oaire.citation.issue7
oaire.citation.volume9
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oairecerif.author.affiliationInstitut für Ökologie und Evolution (IEE)
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oairecerif.author.affiliationInstitut für Ökologie und Evolution (IEE)
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unibe.date.licenseChanged2020-09-01 14:30:28
unibe.description.ispublishedpub
unibe.eprints.legacyId146071
unibe.journal.abbrevTitlePathogens
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