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  3. Multi-Biomarker Prediction Models for Multiple Infection Episodes Following Blunt Trauma
 

Multi-Biomarker Prediction Models for Multiple Infection Episodes Following Blunt Trauma

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BORIS DOI
10.7892/boris.148818
Publisher DOI
10.1016/j.isci.2020.101659
PubMed ID
33047099
Description
Severe trauma predisposes patients to multiple independent infection episodes (MIIEs), leading to augmented morbidity and mortality. We developed a method to identify increased MIIE risk before clinical signs appear, which is fundamentally different from existing approaches entailing infections' detection after their establishment. Applying machine learning algorithms to genome-wide transcriptome data from 128 adult blunt trauma patients' (42 MIIE cases and 85 non-cases) leukocytes collected ≤48 hr of injury and ≥3 days before any infection, we constructed a 15-transcript and a 26-transcript multi-biomarker panel model with the least absolute shrinkage and selection operator (LASSO) and Elastic Net, respectively, which accurately predicted MIIE (Area Under Receiver Operating Characteristics Curve [AUROC] [95% confidence intervals, CI]: 0.90 [0.84-0.96] and 0.92 [0.86-0.96]) and significantly outperformed clinical models. Gene Ontology and network analyses found various pathways to be relevant. External validation found our model to be generalizable. Our unique precision medicine approach can be applied to a wide range of patient populations and outcomes.
Date of Publication
2020
Publication Type
Article
Subject(s)
600 Technology > 610 Medicine & health
Language(s)
en
Contributor(s)
Tsurumi, Amy
Flaherty, Patrick J.
Que, Yok-Aiorcid-logo
Universitätsklinik für Intensivmedizin
Ryan, Colleen M.
Mendoza, April E.
Almpani, Marianna
Bandyopadhaya, Arunava
Ogura, Asako
Dhole, Yashoda V.
Goodfield, Laura F.
Tompkins, Ronald G.
Rahme, Laurence G.
Additional Credits
Universitätsklinik für Intensivmedizin
Series
iScience
Publisher
Elsevier
ISSN
2589-0042
Access(Rights)
open.access
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