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  3. Quantifying endothelial damage by digital droplet polymerase chain reaction (PCR) of endothelial cell-free DNA in COVID-19 patients.

Quantifying endothelial damage by digital droplet polymerase chain reaction (PCR) of endothelial cell-free DNA in COVID-19 patients.

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Description
Tiphaine Ruggeri and Gertrud Wiedemann contributed equally to this study.
Cédric Hirzel, Naomi Porret, and Sacha Zeerleder share last authorship.
DOI
10.48620/94890
Publisher DOI
10.1016/j.rpth.2025.103320
PubMed ID
41732304
Abstract
Background
COVID-19, caused by SARS-CoV-2, triggers severe systemic inflammation and multiple organ dysfunction. Microvascular complications, potentially arising from endothelial cell infection and/or immunothrombosis, play a central role in the disease's pathophysiology. Upon cell activation and/or cell death, cells release cell-free DNA (cfDNA) into the circulation, and cfDNA derived specifically from endothelial cells may serve as a marker of microvascular damage severity.
Objectives
In this study, we aimed to develop an assay to specifically measure endothelial cell-derived DNA as a marker of microvascular damage in COVID-19 patients.
Methods
In this study, we developed a methylation-specific digital droplet polymerase chain reaction assay targeting the promoter of the NOS3 gene to quantify circulating endothelial cell-derived cfDNA in COVID-19 patients followed longitudinally at inclusion, day 11, and day 28.
Results
Total cfDNA and endothelial-specific cfDNA levels significantly increased with COVID-19 disease severity, with the highest levels in patients with severe COVID-19. Notably, patients with mild COVID-19 showed endothelial cfDNA levels comparable to those of healthy controls, and levels remained stable from inclusion through day 28. In contrast, patients with moderate disease severity showed significantly elevated endothelial cfDNA levels compared with controls, which declined over time. Patients with severe COVID-19 displayed persistently high endothelial cfDNA levels throughout the observation period.
Conclusion
Using a digital droplet polymerase chain reaction assay specific for cfDNA from endothelial cells, we demonstrated endothelial cell damage in patients with COVID-19 that correlated with disease severity.
Date Issued
2026-01
Publication Type
Article
Subject(s)
600 Technology > 610 Medicine & health
Subjects
COVID-19
•
cell-free nucleic acids
•
digital PCR
•
endothelial cells
•
methylation
•
microcirculation
•
nitric oxide synthase type III
•
thrombosis
Language(s)
en
Author(s)
Ruggeri, Tiphaine  
Clinic of Haematology and Central Haematological Laboratory  
Department for BioMedical Research, Forschungsgruppe Hämatologie / Onkologie (Pädiatrie)  
Wiedemann, Gertrud  
Department for BioMedical Research (DBMR)  
Clinic of Haematology and Central Haematological Laboratory  
Schärz, Noëlia  
Department for BioMedical Research, Forschungsgruppe Hämatologie (Erwachsene)  
Hügli, Barbara
Limacher, Andreas  
Clinical Trials Unit Bern (CTU) - Statistics & Methodology  
Department of Clinical Research (DCR)  
Hirzel, Cédric  
Clinic of Infectiology  
Porret, Naomi  
Department for BioMedical Research, Forschungsgruppe Hämatologie (Erwachsene)  
Clinic of Haematology and Central Haematological Laboratory  
Zeerleder, Sacha  
Additional Credits
Department for BioMedical Research (DBMR)  
Clinic of Infectiology  
Clinic of Haematology and Central Haematological Laboratory  
Clinical Trials Unit Bern (CTU) - Statistics & Methodology  
Department for BioMedical Research, Forschungsgruppe Hämatologie (Erwachsene)  
Department for BioMedical Research, Forschungsgruppe Hämatologie / Onkologie (Pädiatrie)  
Department of Clinical Research (DCR)  
Institute of Clinical Chemistry  
Journal
Research and Practice in Thrombosis and Haemostasis
Publisher
Elsevier
ISSN
2475-0379
Access(Rights)
open.access
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