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  3. DeepPyramid+: medical image segmentation using Pyramid View Fusion and Deformable Pyramid Reception.

DeepPyramid+: medical image segmentation using Pyramid View Fusion and Deformable Pyramid Reception.

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DOI
10.48350/191354
Publisher DOI
10.1007/s11548-023-03046-2
PubMed ID
38189905
Abstract
PURPOSE

Semantic segmentation plays a pivotal role in many applications related to medical image and video analysis. However, designing a neural network architecture for medical image and surgical video segmentation is challenging due to the diverse features of relevant classes, including heterogeneity, deformability, transparency, blunt boundaries, and various distortions. We propose a network architecture, DeepPyramid+, which addresses diverse challenges encountered in medical image and surgical video segmentation.

METHODS

The proposed DeepPyramid+ incorporates two major modules, namely "Pyramid View Fusion" (PVF) and "Deformable Pyramid Reception" (DPR), to address the outlined challenges. PVF replicates a deduction process within the neural network, aligning with the human visual system, thereby enhancing the representation of relative information at each pixel position. Complementarily, DPR introduces shape- and scale-adaptive feature extraction techniques using dilated deformable convolutions, enhancing accuracy and robustness in handling heterogeneous classes and deformable shapes.

RESULTS

Extensive experiments conducted on diverse datasets, including endometriosis videos, MRI images, OCT scans, and cataract and laparoscopy videos, demonstrate the effectiveness of DeepPyramid+ in handling various challenges such as shape and scale variation, reflection, and blur degradation. DeepPyramid+ demonstrates significant improvements in segmentation performance, achieving up to a 3.65% increase in Dice coefficient for intra-domain segmentation and up to a 17% increase in Dice coefficient for cross-domain segmentation.

CONCLUSIONS

DeepPyramid+ consistently outperforms state-of-the-art networks across diverse modalities considering different backbone networks, showcasing its versatility. Accordingly, DeepPyramid+ emerges as a robust and effective solution, successfully overcoming the intricate challenges associated with relevant content segmentation in medical images and surgical videos. Its consistent performance and adaptability indicate its potential to enhance precision in computerized medical image and surgical video analysis applications.
Date Issued
2024-05
Publication Type
Article
Subject(s)
500 Science > 570 Life sciences; biology
600 Technology > 610 Medicine & health
Subjects
Deformable Convolutions Deformable Pyramid Reception Dilated Convolutions Medical Images Neural Networks Pyramid View Fusion Semantic Segmentation Surgical Videos
Language(s)
en
Author(s)
Ghamsarian, Negin  orcid-logo
ARTORG Center for Biomedical Engineering Research  
ARTORG Center for Biomedical Engineering Research - AI in Medical Imaging Laboratory
Wolf, Sebastian
Universitätsklinik für Augenheilkunde  
Zinkernagel, Martin Sebastian  orcid-logo
Universitätsklinik für Augenheilkunde  
Schoeffmann, Klaus
Sznitman, Raphael  orcid-logo
ARTORG Center for Biomedical Engineering Research  
ARTORG Center for Biomedical Engineering Research - AI in Medical Imaging Laboratory
Additional Credits
Universitätsklinik für Augenheilkunde  
ARTORG Center for Biomedical Engineering Research  
ARTORG Center for Biomedical Engineering Research - AI in Medical Imaging Laboratory
Journal
International journal of computer assisted radiology and surgery
Publisher
Springer
ISSN
1861-6429
Access(Rights)
Unknown
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